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Add normalisation of diffractograms (default: True=

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This commit is contained in:
rasmusvt 2022-03-23 14:26:43 +01:00
parent 06753ab6b2
commit 0fb8883d19
2 changed files with 9 additions and 1 deletions
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6
beamtime/xrd/plot.py
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@ -19,7 +19,7 @@ def plot_diffractogram(data, options={}):
data (dict): Must include path = string to diffractogram data, and plot_kind = (recx, beamline, image)'''
# Update options
required_options = ['x_vals', 'y_vals', 'ylabel', 'xlabel', 'xunit', 'yunit', 'line', 'scatter', 'xlim', 'ylim',
required_options = ['x_vals', 'y_vals', 'ylabel', 'xlabel', 'xunit', 'yunit', 'line', 'scatter', 'xlim', 'ylim', 'normalise',
'reflections_plot', 'reflections_indices', 'reflections_data', 'plot_kind', 'palettes', 'interactive', 'rc_params', 'format_params']
default_options = {
@ -28,6 +28,7 @@ def plot_diffractogram(data, options={}):
'ylabel': 'Intensity', 'xlabel': '2theta',
'xunit': 'deg', 'yunit': 'a.u.',
'xlim': None, 'ylim': None,
'normalise': True,
'line': True, # whether or not to plot diffractogram as a line plot
'scatter': False, # whether or not to plot individual data points
'reflections_plot': False, # whether to plot reflections as a plot
@ -55,9 +56,12 @@ def plot_diffractogram(data, options={}):
for index in range(len(data['path'])):
diffractogram, wavelength = xrd.io.read_data(data=data, options=options, index=index)
data['diffractogram'][index] = diffractogram
data['wavelength'][index] = wavelength
else:
if not isinstance(data['diffractogram'], list):
data['diffractogram'] = [data['diffractogram']]