rasmus/nafuma
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  • a77eb23a38 Make sure e0_diff is loaded as float, not str rasmusvt 2022-08-16 11:43:56 +02:00
  • 24a7b12299 Extend save / load functions to include e0 rasmusvt 2022-08-16 11:16:20 +02:00
  • cd0eaff25b Make BATSMALL-read more general and import decimal = , rasmusvt 2022-08-15 17:35:01 +02:00
  • 0a6d682649 Add working plot_xanes function rasmusvt 2022-08-09 17:35:41 +02:00
  • e67846d6f2 Initial commit of plot_xanes rasmusvt 2022-08-09 16:41:53 +02:00
  • b40b023cbc Let load_data conform to data/options-standard rasmusvt 2022-08-09 16:41:39 +02:00
  • 731ea70f77 Add functions to save and load data rasmusvt 2022-08-09 16:26:49 +02:00
  • 9cda7694d0 Add choice to load transmission data rasmusvt 2022-08-08 16:40:45 +02:00
  • df5190667e Ad plotting of CV-data rasmusvt 2022-08-08 15:45:09 +02:00
  • 9a73f57a82 Allow reading CV data from BioLogic rasmusvt 2022-08-08 15:44:55 +02:00
  • b69a4b9521 Plot efficiencies without changing options rasmusvt 2022-08-05 11:01:09 +02:00
  • 790048098a Make plotting match new format of summary df rasmusvt 2022-08-05 10:35:59 +02:00
  • b8ce2b64cc Add efficiency calculations and new format of summary df rasmusvt 2022-08-05 10:35:35 +02:00
  • 745522ed82 Calculate specific energy in Neware data rasmusvt 2022-08-05 09:51:28 +02:00
  • 642f166d71 Constrain size for GIFs, fix fps and incomp cycles rasmusvt 2022-08-04 18:57:27 +02:00
  • b6780e8a90 Add option to make animation of GC plots rasmusvt 2022-08-02 21:55:55 +02:00
  • 4269ac5d46 Fix formatting error in unit conversion rasmusvt 2022-08-02 21:55:42 +02:00
  • 43663331f1 Remove print statement rasmusvt 2022-08-02 13:49:09 +02:00
  • 8c20c029ae Fix bug rasmusvt 2022-08-02 13:48:53 +02:00
  • e6a4e2c81f Allow deletion of certain datapoints from the datasets rasmusvt 2022-08-02 13:48:29 +02:00
  • 116e65e0e1 Make 'which_cycles' work for summaries rasmusvt 2022-08-02 13:24:55 +02:00
  • 3a6a000b14 Allow older formats and manual incrementing of cycles rasmusvt 2022-08-02 13:24:39 +02:00
  • 130e120690 Chg and dchg of summary can be plotted independent rasmusvt 2022-08-02 10:04:49 +02:00
  • 0e053ea1e2 Make ticks face in by default rasmusvt 2022-08-02 10:03:49 +02:00
  • 20111a7457 Allow plotting of summary through plot_gc() rasmusvt 2022-08-01 17:00:26 +02:00
  • 224d05e0e9 Return summary as separte chg / dchg dataframes rasmusvt 2022-08-01 17:00:10 +02:00
  • 0699399d1a Mix intervals and ints in update_cycles rasmusvt 2022-08-01 16:37:37 +02:00
  • 9ebab7d6ee Add splice cycles for Neware (summary + cycles) rasmusvt 2022-08-01 15:47:46 +02:00
  • 574f633db0 Add correct unit conversion of Neware summaries rasmusvt 2022-08-01 14:50:10 +02:00
  • c67629bef6 Merge branch 'master' of github.com:rasmusthog/nafuma rasmusvt 2022-08-01 11:05:05 +02:00
  • 9f9d364a2f Allow loading of Neware datasets from parent dirs rasmusvt 2022-08-01 11:04:59 +02:00
  • 7e952a4556 tester fra laptop Halvor Høen Hval 2022-07-20 18:00:33 +02:00
  • f0acae491f
         Merge pull request #12 from rasmusthog/rasmus_refinements Rasmus Vester Thøgersen 2022-07-16 07:36:26 +00:00
  • 772bd25019 Merge branch 'rasmus_refinements' of github.com:rasmusthog/nafuma into rasmus_refinements rasmusvt 2022-07-15 11:51:47 +02:00
  • fb040aa0e5 Strip headers from INPs when making big file rasmusvt 2022-07-15 11:51:43 +02:00
  • dec40c217c Merge branch 'rasmus_refinements' of github.com:rasmusthog/nafuma into rasmus_refinements halvorhv 2022-07-15 11:35:09 +02:00
  • ed5d96bf4e read_cif now can read cifs w/o cell_volume halvorhv 2022-07-15 11:35:04 +02:00
  • c987fc689f Fix get_headers to read new formatting correctly rasmusvt 2022-07-15 11:26:57 +02:00
  • 7ea27abf3a Add function to get unique entries in list rasmusvt 2022-07-15 11:25:27 +02:00
  • 4e579bd07b dirty fix to enable read cif w/o cell_volume halvorhv 2022-07-14 21:44:36 +02:00
  • 92075fbb66 Fix filenames in make_big_inp and add fixmes rasmusvt 2022-07-14 19:47:36 +02:00
  • ace44cb48f Add initial INP-generation rasmusvt 2022-07-14 19:15:39 +02:00
  • 51e2928472 Add cif-reader and inital INP-generator rasmusvt 2022-07-13 17:26:29 +02:00
  • d32b40409c Add intial version of refinement function rasmusvt 2022-07-12 17:51:08 +02:00
  • 71f3940c12 Add creation of .INP-file for multiple refinements rasmusvt 2022-07-11 17:38:40 +02:00
  • 7ff917bdcd Change timestamp to modified instead of creation rasmusvt 2022-07-11 17:38:13 +02:00
  • cf9499a988 Initial commit of refinement submodule rasmusvt 2022-07-11 13:40:24 +02:00
  • 649196570b Add generic backup file function rasmusvt 2022-07-11 13:39:50 +02:00
  • 132bc7274b Update version number rasmusvt 2022-07-08 17:46:15 +02:00
  • 03b1e4719b
         Merge pull request #11 from rasmusthog/rasmus_htxrd Rasmus Vester Thøgersen 2022-07-08 17:44:42 +02:00
  • 26c8813eae Add comment I will be happy for in the future rasmusvt 2022-07-08 17:43:44 +02:00
  • c9b620f166 Get HT-XRD plotting to a working state rasmusvt 2022-07-08 17:41:13 +02:00
  • c6b5dc4627 Update with new version number rasmusvt 2022-07-07 15:15:07 +02:00
  • b755c1e55d
         Merge pull request #10 from rasmusthog/rasmus_htxrd Rasmus Vester Thøgersen 2022-07-07 15:01:27 +02:00
  • c479575c85
         Merge pull request #9 from rasmusthog/halvor_xanes Rasmus Vester Thøgersen 2022-07-07 14:58:08 +02:00
  • 28b807c9f9
         Merge branch 'master' into halvor_xanes Rasmus Vester Thøgersen 2022-07-07 14:57:48 +02:00
  • 7f61617d9a Add HTXRD-reading with saving in individual files rasmusvt 2022-07-07 14:52:56 +02:00
  • f2a5a25aaf Merge branch 'halvor_xanes' of github.com:rasmusthog/nafuma into halvor_xanes halvorhv 2022-07-07 14:52:00 +02:00
  • 8096cf3bd5 no change halvorhv 2022-07-07 14:51:57 +02:00
  • f0c547f889 Adding function to rearrange filenames-array halvorhv 2022-07-07 14:49:27 +02:00
  • b1b705f28f Ignore makedirs-command if file in base folder rasmusvt 2022-07-07 13:07:22 +02:00
  • 0ed85e1398 Write timestamp during split and add reading of metadata rasmusvt 2022-07-07 11:50:15 +02:00
  • 8939bb8479 Remove annoying print in normalise() rasmusvt 2022-07-07 11:49:58 +02:00
  • 4cec8d2756 added FIXMEs halvorhv 2022-07-07 10:24:04 +02:00
  • 6eb45772d1 Fix normalisation issues rasmusvt 2022-07-06 17:33:38 +02:00
  • 327cef5b51 Log updates and let normalise and flatten save plots rasmusvt 2022-07-05 16:37:42 +02:00
  • 5e2cef2cde Let save_options create folder if it doesn't exist rasmusvt 2022-07-05 16:37:31 +02:00
  • da7099a924 Add manual choice of active roi rasmusvt 2022-07-05 10:55:39 +02:00
  • b5cac158a4 Fix active_roi determination rasmusvt 2022-07-04 18:18:31 +02:00
  • 1a06e7b4fc Poor attempts at fixing bug in roi choice rasmusvt 2022-07-01 16:09:43 +02:00
  • 7336af061f Only plot one dataset if in interactive mode rasmusvt 2022-07-01 14:29:13 +02:00
  • eb8660d71d Fix determination of active roi if only one exists rasmusvt 2022-06-30 17:08:28 +02:00
  • 1757445f89 Add new functions and fix certain bugs rasmusvt 2022-06-30 17:08:14 +02:00
  • 8702cdfa00 Make logfile-directory if not already exists rasmusvt 2022-06-30 17:07:31 +02:00
  • b84cecaf84 Update documentation rasmusvt 2022-06-29 16:40:36 +02:00
  • 254becff69 Make sure filenames is a list before reading rasmusvt 2022-06-29 16:13:19 +02:00
  • c0af1dc84c
         Merge pull request #8 from rasmusthog/rasmus_xanes_interactive Rasmus Vester Thøgersen 2022-06-29 15:27:43 +02:00
  • faf41db41f Add tabulated K-edge values rasmusvt 2022-06-29 15:26:51 +02:00
  • 6bbd6776b8 Tweaks based on workflow testing rasmusvt 2022-06-29 15:26:43 +02:00
  • c522b73ca4 Add K-edges from ITC Vol C rasmusvt 2022-06-28 12:10:46 +02:00
  • cc3c4dc5b6 Add interactive to smoothing + documentation updates rasmusvt 2022-06-27 20:46:01 +02:00
  • 1e147854a7 Update documentation for determination of edge position rasmusvt 2022-06-27 16:43:42 +02:00
  • 8c2723ee55 Plot full scan with computed edge position rasmusvt 2022-06-27 16:16:46 +02:00
  • 537c7b3c5a Add masks to pre and post edge fitting rasmusvt 2022-06-27 13:34:18 +02:00
  • 8e0d8f4861 ADd interactive mode for pre and post edge fitting rasmusvt 2022-06-27 12:20:49 +02:00
  • 931b3e42ae adding a fixme for split_scan_data-function halvorhv 2022-06-24 19:39:11 +02:00
  • 726535c66f fixing the "add_rois"-option halvorhv 2022-06-24 19:28:55 +02:00
  • b2b19086a5
         Merge pull request #7 from rasmusthog/rasmus_xanes nanowhale 2022-06-24 17:00:11 +02:00
  • 2b14a64c4b Attempt to get flattening and normalisation to behave properly rasmusvt 2022-06-23 15:32:29 +02:00
  • ec1fba1c82 Refactor normalisation and flattening functions rasmusvt 2022-06-23 11:46:06 +02:00
  • 4d501adb72 Complete smooth and get determine_edge_position going rasmusvt 2022-06-22 15:56:34 +02:00
  • 9e39135f00 Update smoothing function rasmusvt 2022-06-21 19:04:04 +02:00
  • 1cf949e36b Start clean-up of smoothing rasmusvt 2022-06-21 18:02:08 +02:00
  • 054311ca10 Small adjustments to logging rasmusvt 2022-06-21 18:01:53 +02:00
  • cc80a48259 Add logging rasmusvt 2022-06-20 19:16:20 +02:00
  • 7214746af1 Refactor split_scans rasmusvt 2022-06-20 16:08:36 +02:00
  • 9c6a7d5991 Refactor post_edge_fit rasmusvt 2022-06-17 16:59:37 +02:00
  • d497217ae3
         Merge pull request #6 from rasmusthog/rasmus_xanes nanowhale 2022-06-17 16:17:54 +02:00
  • 672d5549fe Fix lint issue rasmusvt 2022-06-17 16:14:21 +02:00
  • ba349a5892 Refactor estimation of edge position and automatise pre edge limit setting rasmusvt 2022-06-17 15:58:39 +02:00