rasmus/nafuma
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  • cb2c7532e6 Make sure data['path'] is in a list rasmusvt 2022-06-17 15:46:33 +02:00
  • 880722d778 Load correct xmap_roi for more cases rasmusvt 2022-06-17 15:35:24 +02:00
  • e7a95d65ed Refactor read_data and move get_filenames rasmusvt 2022-06-16 17:56:08 +02:00
  • 0b89524ef1 Clear up small bugs encountered during testing rasmusvt 2022-06-16 17:55:42 +02:00
  • 303704c357 Add filter rasmusvt 2022-06-16 17:54:51 +02:00
  • 0d757ce365 Move get_filenames to auxillary and generalise rasmusvt 2022-06-16 16:26:41 +02:00
  • a49fc8b0d2 Refactor read_data rasmusvt 2022-06-16 16:18:22 +02:00
  • 2baa765806 Quasi-fixed linting issue causing automatic test to fail rasmusvt 2022-06-16 15:55:21 +02:00
  • bac137042e Refactor pre edge subtraction rasmusvt 2022-06-16 15:42:50 +02:00
  • e0b71a85b7 Add save fit function to pre edge fit function rasmusvt 2022-06-16 14:58:41 +02:00
  • 7485adef07 Adding sketch for normalization and flattening halvorhv 2022-06-15 16:00:47 +02:00
  • d17e715d82 Separating and refactoring pre_edge_normalisation rasmusvt 2022-06-15 14:50:32 +02:00
  • 909c616c50 Add function to write out log messages rasmusvt 2022-06-15 14:28:50 +02:00
  • d88a302d2a Add Fe and Co to find_element and refactor rasmusvt 2022-06-15 13:44:42 +02:00
  • 7676bd06af Adding FIXME's halvorhv 2022-06-15 13:21:26 +02:00
  • 8ce1557439 finding e0 halvorhv 2022-06-15 10:00:13 +02:00
  • ebc77c1b9e Extract data from .brml heatscans and save as .xy rasmusvt 2022-06-13 13:50:24 +02:00
  • a7f6abe0b9
         Merge pull request #5 from rasmusthog/rasmus_pyfai Rasmus Vester Thøgersen 2022-06-13 09:06:15 +00:00
  • a1106ac88d Add option to use mask with pyfai-integrations rasmusvt 2022-05-20 17:41:54 +02:00
  • 9490c338c1
         Merge pull request #4 from rasmusthog/rasmus_small_improvements Rasmus Vester Thøgersen 2022-05-19 19:33:02 +00:00
  • da8907083b Fix arcsin issue and allow plotting w/o reflection data rasmusvt 2022-05-19 21:32:10 +02:00
  • 55b22d5bf1 Small improvements to integrate function rasmusvt 2022-05-12 19:17:43 +02:00
  • 23f037c0ef Add function to strip headers from .xy rasmusvt 2022-05-11 18:35:11 +02:00
  • 8f94fa4dc6 Remove outcommented lines in splice_cycles rasmusvt 2022-05-10 17:30:00 +02:00
  • 8d8cad966d Allow plotting of multiple beamline scans (quickfix) rasmusvt 2022-05-10 17:29:22 +02:00
  • c9660109cb adding a smoothing function halvorhv 2022-04-27 10:37:02 +02:00
  • d30c9c3b16 Add change of x-values in interactive mode rasmusvt 2022-04-22 16:45:28 +02:00
  • 7af1dc4228 Add initial interactive capabilities to GC-plots rasmusvt 2022-04-22 16:31:04 +02:00
  • 2ed2117eac
         Merge pull request #3 from rasmusthog/rasmus_ec_standard_functions Rasmus Vester Thøgersen 2022-04-22 13:51:00 +00:00
  • 5735d011aa Add correct formatting of x- and y-labels for EC-plots rasmusvt 2022-04-22 15:49:02 +02:00
  • 514a20604b Standardise data flow rasmusvt 2022-04-22 15:19:36 +02:00
  • 95e411ac21 Fix bugs giving errors with plot_gc() rasmusvt 2022-04-22 13:03:31 +02:00
  • b586f46979
         Merge pull request #2 from rasmusthog/rasmus_docs Rasmus Vester Thøgersen 2022-04-22 09:11:59 +00:00
  • cd5cbe5dd4 Add first draft of docs built with sphinx rasmusvt 2022-04-08 18:16:57 +02:00
  • f52f00a0b7 Clean up files rasmusvt 2022-04-08 15:32:55 +02:00
  • 80cc8f6779 Clean up files rasmusvt 2022-04-08 15:31:40 +02:00
  • 4b74ea4592 Fixing another lint problem rasmusvt 2022-04-08 14:47:35 +02:00
  • 67ba03dc0c Fix lint problem in xanes.io.py rasmusvt 2022-04-08 14:30:05 +02:00
  • 092ecfa380
         Merge pull request #1 from rasmusthog/halvor_xanes Rasmus Vester Thøgersen 2022-04-08 13:36:30 +02:00
  • b242602eba Merge halvor_xanes to master rasmusvt 2022-04-08 13:35:13 +02:00
  • 7962b3fc5c Fixing functions halvorhv 2022-04-08 13:28:47 +02:00
  • de2616067d Rename automated test workflow rasmusvt 2022-04-07 17:19:26 +02:00
  • f53527fe0b Clean up test files rasmusvt 2022-04-07 17:17:28 +02:00
  • 08276301f2 Update imports to match new package name rasmusvt 2022-04-07 17:11:14 +02:00
  • 27c911cf54 Rename package to nafuma from beamtime rasmusvt 2022-04-07 17:05:52 +02:00
  • 049f30d96b Fix last remaining liniting issue rasmusvt 2022-04-07 15:47:26 +02:00
  • 3d99af9a7a Fix linting issues rasmusvt 2022-04-07 15:39:07 +02:00
  • de8c0ab8d5 Add install of package to workflow rasmusvt 2022-04-07 15:28:49 +02:00
  • 601a5b0619 Add conda-forge to channels rasmusvt 2022-04-07 15:19:57 +02:00
  • 2c697be9da
         New attempt at setting up workflow Rasmus Vester Thøgersen 2022-04-07 15:18:17 +02:00
  • 19918b3207 Remove old workflow rasmusvt 2022-04-07 15:17:39 +02:00
  • ceb9d1ab46 Upload new environment rasmusvt 2022-04-07 15:15:12 +02:00
  • 89ea45a9bf Make manual environment file rasmusvt 2022-04-07 14:50:09 +02:00
  • bae40fcabd
         Set up third attempt at autotesting Rasmus Vester Thøgersen 2022-04-07 14:41:29 +02:00
  • 521ee4731d Merge branch 'master' of github.com:rasmusthog/nafuma rasmusvt 2022-04-07 14:40:48 +02:00
  • c8f1f64af8 Update environment.yml without build rasmusvt 2022-04-07 14:40:38 +02:00
  • e8bc4d4bc4
         Delete second attempt at setting up automated testing Rasmus Vester Thøgersen 2022-04-07 14:39:03 +02:00
  • c10317c1d3 Update requirements with --no-build tag rasmusvt 2022-04-07 14:35:41 +02:00
  • c9885976f6
         Change python version in automated testing Rasmus Vester Thøgersen 2022-04-07 14:24:57 +02:00
  • 739b197e9a
         Set up automated testing with conda Rasmus Vester Thøgersen 2022-04-07 14:23:03 +02:00
  • b5f4f98070
         Delete first attempt at automated testing Rasmus Vester Thøgersen 2022-04-07 14:22:28 +02:00
  • 024f1aa822 Merge branch 'master' of github.com:rasmusthog/nafuma rasmusvt 2022-04-07 14:17:39 +02:00
  • 5c9c93fbb6 Exporting new requirements and environment rasmusvt 2022-04-07 14:14:38 +02:00
  • 239ea9f61e
         Create automated testing Rasmus Vester Thøgersen 2022-04-07 14:10:25 +02:00
  • bf68988665 Add more tests for plotting.py and made more general rasmusvt 2022-04-07 14:05:40 +02:00
  • baa253ab3e tester fra vscode halvorhv 2022-04-07 12:34:49 +02:00
  • ab6bf23100 testing from terminal halvorhv 2022-04-07 12:30:32 +02:00
  • aafcc5a1ed Test of push in VS Code rasmusvt 2022-04-07 12:25:31 +02:00
  • e8ae6ba122 Testing push on new repo again rasmusvt 2022-04-07 12:21:43 +02:00
  • a84bd065b2 Testing push on new repo rasmusvt 2022-04-07 12:20:08 +02:00
  • 1db489c21d First commit on new repo rasmusvt 2022-04-07 12:02:13 +02:00
  • 135d577b4b Adjusting post edge processing halvorhv 2022-04-07 11:34:44 +02:00
  • 872ae759b2 Optimizing code and splitting into smaller functions halvorhv 2022-04-06 21:10:40 +02:00
  • 4ea0fcce4b Merge pull request #4 from rasmusvt/rasmus_pytest Rasmus Vester Thøgersen 2022-04-06 17:30:34 +02:00
  • e3b0e2bc14 Move some files to root folder rasmusvt 2022-04-06 17:29:45 +02:00
  • d702875ab6 Ignore DeprecationWarning rasmusvt 2022-04-06 17:28:04 +02:00
  • 4587322a9b Add tests for plotting.py rasmusvt 2022-04-06 17:25:46 +02:00
  • 657276eb91 Add tests for auxillary.py rasmusvt 2022-04-06 15:57:30 +02:00
  • e07acdb4bb Remove packages not used rasmusvt 2022-04-06 15:06:03 +02:00
  • 1146c04a38 Add first tests rasmusvt 2022-04-06 15:02:38 +02:00
  • bdfc319013 Initial commit of test rasmusvt 2022-04-06 14:43:07 +02:00
  • 3b1d068e14 Merge pull request #3 from rasmusvt/rasmus_heatmap Rasmus Vester Thøgersen 2022-04-06 14:27:32 +02:00
  • 6372603324 Translate relfections to heatmap x-coords rasmusvt 2022-04-06 13:42:34 +02:00
  • dd7f2d9dea Fix bug making last commit not work as intended rasmusvt 2022-04-06 12:44:33 +02:00
  • 876e0f8d3d Allow rescaling ylim with interactive diff plot rasmusvt 2022-04-05 16:12:19 +02:00
  • c0449f2e18 Correct switch of ylim between diff and heatmap rasmusvt 2022-04-05 13:52:27 +02:00
  • 5541f44a58 Add automatic change of xlim range with heatmaps rasmusvt 2022-04-04 16:47:01 +02:00
  • 59629fcb61 Add plotting of heatmaps with true xlim rasmusvt 2022-04-04 14:50:20 +02:00
  • b0629de9a3 Add functions to round up and down to nearest dec rasmusvt 2022-04-04 14:48:59 +02:00
  • 567282b80b Fix bug where extract_folder had no default value rasmusvt 2022-04-04 14:48:29 +02:00
  • 6e851b494b Add heatmap, lacks mapping between x-value and 2th rasmusvt 2022-03-31 17:29:10 +02:00
  • b0130d49b8 Working on the calibration of the XANES-data, subtracting background and defining post-edge halvorhv 2022-03-31 17:05:32 +02:00
  • bdce18d195 Merge pull request #2 from rasmusvt/rasmus_interactive_offset Halvor Høen Hval 2022-03-31 14:07:59 +02:00
  • 6f9fefae08 Add interactive offset_x rasmusvt 2022-03-31 14:02:04 +02:00
  • f504c7dd69 Add interactive offset_y rasmusvt 2022-03-31 13:52:59 +02:00
  • c637bdce6a Merge pull request #1 from rasmusvt/rasmus_multidiff Rasmus Vester Thøgersen 2022-03-31 11:08:36 +02:00
  • 7c95135c33 Initial commit to XANES-module halvorhv 2022-03-31 11:04:20 +02:00
  • 3e4c0a9fc2 Add slider for offset_y (not working yet) rasmusvt 2022-03-30 17:50:41 +02:00
  • 223be18c3e Change default behaviour with 10+ plots rasmusvt 2022-03-30 17:40:06 +02:00
  • 0fbfd20a74 Enable reading of CoupledTwoTheta-scans rasmusvt 2022-03-30 16:11:34 +02:00